Tool library
Tools for primer design and sequence analysis
Pick a tool to get started. New tools roll out monthly — see what's coming next below.
Primer design
Targeted Sequencing Primer Design
Design custom amplicon panels covering whole genes, gene lists, or whole reference sequences. The flagship Primer Architect flow.
Open tool
Primer design
Single primer pair designer
Design a single PCR primer pair for a specific region. Uses primer3 with TeselaGen's quality presets.
Open tool
Sequence analysis
Hairpin analyzer
Detect secondary-structure hairpins in a DNA sequence with ΔG and Tm reporting. Great for sanity-checking hand-crafted primers.
Open tool
Coming soon
Sequence analysis
Off-target analyzer
Check primer specificity against a reference genome using a k-mer mismatch database. Catches off-target amplification before you order.
Templates
Predesigned panels
Browse curated panels (cancer hotspot, pharmacogenomics, …) and clone them as a starting point for your own design.
Open tool
Coming soon
Templates
Custom genome upload
Upload your own FASTA reference, index it, and use it as the target genome for any design flow.